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Best free cw decoder software8/7/2023 The prediction generated by any method in e-RNA can be readily visualised on the web-server. ![]() The web-server R-Chie which visualises RNA secondary structure information in terms of arc diagrams, can now be used to also visualise and intuitively compare RNA–RNA, RNA–DNA and DNA–DNA interactions alongside multiple sequence alignments and quantitative information. New tool ShapeSorter can predict evolutionarily conserved RNA secondary structure features while simultaneously taking experimental SHAPE probing evidence into account. The new method CoBold can identify transient RNA structure features and their potential functional effects on a known RNA structure during co-transcriptional structure formation. In this updated version, we have added novel tools for RNA secondary structure prediction and have significantly updated the visualisation functionality. E-RNA is a collection of web-servers for the prediction and visualisation of RNA secondary structures and their functional features, including in particular RNA–RNA interactions.
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